2.3 Predicted Gene models
By combining several different gene predictors(see methods),we identified 12,080 protein-coding gene models,245 tRNA,1 rRNA and 15 snRNA with a total length of 17,343,729bp,accounting for 43.41% of the genome(Table 1).The gene density was 3.34 genes/10kb and the average gene size of protein coding genes was 1435bp,typically with small exons(average 230bp)and much smaller introns(average 100bp),which were similar with other basidiomycetes[20].There were average 6.25 exons in one gene.Notably,the G+C content in protein coding gene regions,which was 58.86%,was slightly higher than the whole genome(55.56%)and other basidiomycetes[20].(https://www.daowen.com)
Among the 245 tRNA genes,10 tRNAs were pseudogenes and 141 tRNAs contained an intron.Forty six out of 61 possible anti-codon tRNA were found,corresponding to the codons of 20 amino acids.Except for several codons,the usage frequencies of most codons were proportional to the numbers of anti-codon proportion.For lacking of 18 anti-codons,we speculated anticodon repertoire in this genome was consistent with the normal wobble rules[22]which allows anticodon:codon pairings:I/ANN:NNU,NNC;GNN:NNU,NNC;UNN:NNA;CNN:NNG).