5.2 DNA isolation,genome sequencing and assembly
Genomic DNA of G.lucidum was isolated by improved cetyl trimethylammonium bromide(CTAB)method[40]and sequenced using a whole-genome shotgun strategy.All data were generated by paired-end sequencing of cloned inserts with two different insert sizes(200bp,6000bp)using Illumina Hiseq2000 Sequencer at BGI-Shenzhen.After removing the low complexity,low quality,adapter and duplication contamination raw reads,the clean reads were assembled using the whole-genome do novo assembler SOAPdenovo[41].(https://www.daowen.com)